Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | SB49_RS01880 | Not Available | Positive | 406406 - 407725 | 48963.7 |
| head gin domain-containing protein | SB49_RS01885 | Not Available | Negative | 407774 - 408499 | 25494.3 |
| hypothetical protein | SB49_RS01890 | Not Available | Negative | 408518 - 409609 | 40634.5 |
| hypothetical protein | SB49_RS01895 | Not Available | Negative | 409621 - 410172 | 21073.5 |
| rna polymerase sigma factor | SB49_RS01900 | Not Available | Negative | 410175 - 410732 | 21531.0 |
| endopeptidase la | SB49_RS01905 | Not Available | Positive | 410949 - 413402 | 91739.1 |
| (d)cmp kinase | SB49_RS01910 | Not Available | Positive | 413517 - 414209 | 26405.8 |
| lysm peptidoglycan-binding domain-containing protein | SB49_RS01915 | Not Available | Negative | 414249 - 414629 | 14022.8 |
| 30s ribosomal protein s1 | SB49_RS01920 | Not Available | Positive | 414891 - 416729 | 68908.8 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | SB49_RS01925 | Not Available | Positive | 416885 - 417424 | 20841.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
