Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS01830 | Not Available | Positive | 396067 - 396555 | 17313.6 |
| type ii 3-dehydroquinate dehydratase | SB49_RS01835 | Not Available | Positive | 396732 - 397151 | 15554.6 |
| duf3817 domain-containing protein | SB49_RS01840 | Not Available | Negative | 397143 - 397424 | 10503.5 |
| dihydrolipoyl dehydrogenase | SB49_RS01845 | Not Available | Negative | 397507 - 398898 | 49723.1 |
| peptide-methionine (r)-s-oxide reductase msrb | SB49_RS01850 | Not Available | Negative | 399167 - 399571 | 15273.5 |
| peptide-methionine (r)-s-oxide reductase msrb | SB49_RS01855 | Not Available | Negative | 399675 - 400166 | 18258.6 |
| hypothetical protein | SB49_RS01860 | Not Available | Negative | 400340 - 400894 | 20353.1 |
| 1,4-alpha-glucan branching protein glgb | SB49_RS01865 | Not Available | Positive | 401079 - 402974 | 73232.3 |
| glycoside hydrolase family 31 protein | SB49_RS01870 | Not Available | Positive | 403078 - 405477 | 92966.9 |
| m48 family metallopeptidase | SB49_RS01875 | Not Available | Positive | 405517 - 406326 | 29185.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
