Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | SB49_RS01780 | Not Available | Negative | 386578 - 387816 | 46063.7 |
| trimeric intracellular cation channel family protein | SB49_RS01785 | Not Available | Positive | 388102 - 388710 | 22279.3 |
| peptidylprolyl isomerase | SB49_RS01790 | Not Available | Negative | 388703 - 389416 | 27139.4 |
| coa pyrophosphatase | SB49_RS01795 | Not Available | Positive | 389415 - 390056 | 24205.3 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SB49_RS01800 | Not Available | Positive | 390095 - 390898 | 31094.1 |
| hypothetical protein | SB49_RS01805 | Not Available | Negative | 390895 - 391542 | 25529.7 |
| rna polymerase sigma factor | SB49_RS01810 | Not Available | Negative | 391543 - 392037 | 19441.2 |
| amidohydrolase | SB49_RS01815 | Not Available | Negative | 392147 - 393574 | 51121.3 |
| nad(p)/fad-dependent oxidoreductase | SB49_RS01820 | Not Available | Positive | 393678 - 394973 | 48682.2 |
| site-specific tyrosine recombinase xerd | SB49_RS01825 | Not Available | Negative | 395011 - 395907 | 34605.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
