Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | SB49_RS01630 | Not Available | Positive | 350583 - 351920 | 49435.8 |
| paqr family membrane homeostasis protein trha | SB49_RS01635 | Not Available | Positive | 351920 - 352570 | 24573.5 |
| duf4268 domain-containing protein | SB49_RS01640 | Not Available | Negative | 352567 - 352995 | 17130.6 |
| zip family metal transporter | SB49_RS01645 | Not Available | Negative | 352996 - 353667 | 25018.8 |
| class i sam-dependent rna methyltransferase | SB49_RS01650 | Not Available | Positive | 353757 - 354920 | 44227.7 |
| hypothetical protein | SB49_RS01655 | Not Available | Positive | 354924 - 355154 | 8691.17 |
| duf6048 family protein | SB49_RS01660 | Not Available | Negative | 355156 - 355902 | 28081.9 |
| duf6452 family protein | SB49_RS01665 | Not Available | Negative | 355883 - 356389 | 18444.8 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | SB49_RS01670 | Not Available | Negative | 356421 - 357833 | 53799.7 |
| ornithine--oxo-acid transaminase | SB49_RS01675 | Not Available | Positive | 358238 - 359524 | 46639.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
