Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ef-hand domain-containing protein | SB49_RS01580 | Not Available | Positive | 341110 - 341376 | 9981.04 |
| 50s ribosomal protein l20 | SB49_RS01585 | Not Available | Negative | 341435 - 341779 | 13241.4 |
| 50s ribosomal protein l35 | SB49_RS15845 | Not Available | Negative | 341875 - 342072 | 7527.54 |
| translation initiation factor if-3 | SB49_RS01590 | Not Available | Negative | 342196 - 342744 | 21210.0 |
| threonine--trna ligase | SB49_RS01595 | Not Available | Negative | 342782 - 344722 | 73213.1 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 345337 - 346854 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 346989 - 347062 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 347185 - 347258 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 347442 - 350273 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 350398 - 350509 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
