Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase family protein | SB49_RS01530 | Not Available | Negative | 330563 - 331516 | 34201.2 |
| transketolase | SB49_RS01535 | Not Available | Negative | 331578 - 332423 | 30831.1 |
| trna guanosine(34) transglycosylase tgt | SB49_RS01540 | Not Available | Positive | 332586 - 333716 | 42996.7 |
| lptf/lptg family permease | SB49_RS01545 | Not Available | Positive | 333716 - 334798 | 41061.4 |
| dmt family transporter | SB49_RS01550 | Not Available | Positive | 334785 - 335681 | 33779.6 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | SB49_RS01555 | Not Available | Positive | 335737 - 336690 | 35784.2 |
| replicative dna helicase | SB49_RS01560 | Not Available | Positive | 336860 - 338407 | 57320.5 |
| hypothetical protein | SB49_RS01565 | Not Available | Positive | 338511 - 339698 | 44554.8 |
| had family hydrolase | SB49_RS01570 | Not Available | Negative | 339695 - 340501 | 30452.2 |
| secondary thiamine-phosphate synthase enzyme yjbq | SB49_RS01575 | Not Available | Positive | 340635 - 341057 | 15685.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
