Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | SB49_RS15600 | Not Available | Negative | 3533121 - 3536327 | 123899.0 |
| response regulator | SB49_RS15605 | Not Available | Negative | 3536340 - 3536786 | 16595.0 |
| hypothetical protein | SB49_RS15610 | Not Available | Negative | 3537015 - 3537422 | 14954.2 |
| apc family permease | SB49_RS15615 | Not Available | Positive | 3537759 - 3538988 | 43755.0 |
| rlua family pseudouridine synthase | SB49_RS15620 | Not Available | Negative | 3539208 - 3539822 | 23056.0 |
| duf998 domain-containing protein | SB49_RS15625 | Not Available | Negative | 3540136 - 3540774 | 23446.0 |
| hypothetical protein | SB49_RS15630 | Not Available | Negative | 3540930 - 3541373 | 17112.4 |
| hypothetical protein | SB49_RS15635 | Not Available | Negative | 3541521 - 3542021 | 19313.4 |
| duf5050 domain-containing protein | SB49_RS15640 | Not Available | Negative | 3542044 - 3542946 | 33784.2 |
| hypothetical protein | SB49_RS15645 | Not Available | Negative | 3543013 - 3543639 | 23989.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
