Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class v-fold plp-dependent enzyme | SB49_RS15550 | Not Available | Negative | 3518351 - 3519613 | 47630.6 |
| serine hydrolase | SB49_RS15555 | Not Available | Positive | 3519929 - 3521233 | 48708.2 |
| ribonuclease e activity regulator rraa | SB49_RS15560 | Not Available | Negative | 3521376 - 3521855 | 17370.9 |
| isocitrate lyase | SB49_RS15565 | Not Available | Negative | 3521943 - 3523577 | 61258.9 |
| malate synthase a | SB49_RS15570 | Not Available | Negative | 3523651 - 3525249 | 61107.0 |
| helix-turn-helix domain-containing protein | SB49_RS15575 | Not Available | Positive | 3525368 - 3526846 | 57069.5 |
| zinc-binding alcohol dehydrogenase family protein | SB49_RS15580 | Not Available | Negative | 3527065 - 3528033 | 34861.5 |
| dihydrofolate reductase family protein | SB49_RS15585 | Not Available | Negative | 3528147 - 3528704 | 20910.1 |
| m14 family metallopeptidase | SB49_RS15590 | Not Available | Negative | 3528773 - 3530032 | 47795.9 |
| hypothetical protein | SB49_RS15595 | Not Available | Negative | 3530283 - 3532664 | 89607.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
