Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam protein | SB49_RS15500 | Not Available | Negative | 3506173 - 3508371 | 83306.1 |
| alpha-glucosidase | SB49_RS15505 | Not Available | Negative | 3508559 - 3510292 | 67335.9 |
| phzf family phenazine biosynthesis protein | SB49_RS15510 | Not Available | Negative | 3510352 - 3511140 | 29414.0 |
| hypothetical protein | SB49_RS15515 | Not Available | Negative | 3511236 - 3514352 | 115938.0 |
| serine hydrolase | SB49_RS15520 | Not Available | Negative | 3514474 - 3515628 | 44188.9 |
| gnat family n-acetyltransferase | SB49_RS15525 | Not Available | Negative | 3515723 - 3516301 | 22060.5 |
| hypothetical protein | SB49_RS15530 | Not Available | Negative | 3516358 - 3516786 | 16355.4 |
| voc family protein | SB49_RS15535 | Not Available | Negative | 3516882 - 3517265 | 14792.5 |
| lactoylglutathione lyase family protein | SB49_RS15540 | Not Available | Negative | 3517400 - 3517912 | 19508.3 |
| helix-turn-helix domain-containing protein | SB49_RS15545 | Not Available | Positive | 3518033 - 3518347 | 12044.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
