Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| division/cell wall cluster transcriptional repressor mraz | SB49_RS15400 | Not Available | Positive | 3483934 - 3484398 | 17473.3 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | SB49_RS15405 | Not Available | Positive | 3484385 - 3485281 | 34189.9 |
| ftsl-like putative cell division protein | SB49_RS15410 | Not Available | Positive | 3485318 - 3485635 | 11642.2 |
| penicillin-binding protein | SB49_RS15415 | Not Available | Positive | 3485635 - 3487641 | 75054.8 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | SB49_RS15420 | Not Available | Positive | 3487638 - 3489101 | 54100.2 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SB49_RS15425 | Not Available | Positive | 3489144 - 3490364 | 45204.8 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | SB49_RS15430 | Not Available | Positive | 3490364 - 3491698 | 49714.7 |
| ftsw/roda/spove family cell cycle protein | SB49_RS15435 | Not Available | Positive | 3491700 - 3492899 | 43283.2 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | SB49_RS15440 | Not Available | Positive | 3492886 - 3493977 | 39995.0 |
| udp-n-acetylmuramate--l-alanine ligase | SB49_RS15445 | Not Available | Positive | 3493997 - 3495349 | 50148.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
