Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | SB49_RS01480 | Not Available | Negative | 324005 - 325255 | 46094.1 |
| Trna-leu | Not Available | Not Available | Positive | 325521 - 325607 | Not Available |
| response regulator | SB49_RS01490 | Not Available | Positive | 325980 - 326387 | 15735.2 |
| Trna-lys | Not Available | Not Available | Positive | 326498 - 326573 | Not Available |
| shikimate kinase | SB49_RS01500 | Not Available | Positive | 326712 - 327224 | 19260.5 |
| phosphoribosyltransferase domain-containing protein | SB49_RS01505 | Not Available | Negative | 327216 - 327713 | 18479.6 |
| methyltransferase domain-containing protein | SB49_RS01510 | Not Available | Negative | 327725 - 328306 | 22544.1 |
| rna-binding s4 domain-containing protein | SB49_RS01515 | Not Available | Negative | 328293 - 328664 | 14452.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SB49_RS01520 | Not Available | Positive | 328743 - 329690 | 34867.5 |
| outer membrane beta-barrel protein | SB49_RS01525 | Not Available | Negative | 329764 - 330342 | 20779.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
