Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | SB49_RS15300 | Not Available | Negative | 3466537 - 3466939 | 14307.5 |
| ribosome small subunit-dependent gtpase a | SB49_RS15305 | Not Available | Positive | 3467044 - 3467994 | 35647.5 |
| d-aminoacyl-trna deacylase | SB49_RS15310 | Not Available | Positive | 3467995 - 3468447 | 16441.8 |
| nucleotide pyrophosphohydrolase | SB49_RS15315 | Not Available | Positive | 3468447 - 3468773 | 12450.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SB49_RS15320 | Not Available | Positive | 3468871 - 3470103 | 44952.6 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | SB49_RS15325 | Not Available | Positive | 3470191 - 3471240 | 40314.6 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | SB49_RS15330 | Not Available | Positive | 3471330 - 3472373 | 39717.6 |
| polyprenyl synthetase family protein | SB49_RS15335 | Not Available | Positive | 3472556 - 3473533 | 37295.6 |
| rna polymerase sigma factor | SB49_RS15340 | Not Available | Positive | 3473744 - 3474310 | 22130.0 |
| hypothetical protein | SB49_RS15345 | Not Available | Positive | 3474402 - 3475166 | 28622.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
