Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylenetetrahydrofolate reductase | SB49_RS15250 | Not Available | Positive | 3453534 - 3454487 | 35753.3 |
| acyloxyacyl hydrolase | SB49_RS15255 | Not Available | Positive | 3454603 - 3455703 | 41537.2 |
| head gin domain-containing protein | SB49_RS15260 | Not Available | Positive | 3455754 - 3456515 | 28296.8 |
| serine hydrolase | SB49_RS15265 | Not Available | Positive | 3456617 - 3457696 | 40446.5 |
| vps10 domain-containing protein | SB49_RS15270 | Not Available | Positive | 3457865 - 3461023 | 116401.0 |
| gliding motility-associated abc transporter atp-binding subunit glda | SB49_RS15275 | Not Available | Negative | 3461120 - 3462016 | 33485.5 |
| prephenate dehydratase | SB49_RS15280 | Not Available | Positive | 3462505 - 3463335 | 31310.9 |
| pyridoxal phosphate-dependent aminotransferase | SB49_RS15285 | Not Available | Positive | 3463332 - 3464477 | 42066.6 |
| prephenate dehydrogenase | SB49_RS15290 | Not Available | Positive | 3464482 - 3465342 | 31828.4 |
| bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type ii | SB49_RS15295 | Not Available | Positive | 3465354 - 3466436 | 40924.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
