Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rrf2 family transcriptional regulator | SB49_RS15200 | Not Available | Positive | 3441217 - 3441627 | 15131.5 |
| duf2061 domain-containing protein | SB49_RS15205 | Not Available | Positive | 3441819 - 3442082 | 9908.21 |
| phosphoadenosine phosphosulfate reductase family protein | SB49_RS15210 | Not Available | Positive | 3442120 - 3442743 | 23641.2 |
| sulfate adenylyltransferase subunit cysd | SB49_RS15215 | Not Available | Positive | 3442809 - 3443756 | 36269.0 |
| sulfate adenylyltransferase subunit 1 | SB49_RS15220 | Not Available | Positive | 3443843 - 3445090 | 46335.1 |
| hepn domain-containing protein | SB49_RS15225 | Not Available | Positive | 3445203 - 3447293 | 77560.8 |
| uroporphyrinogen-iii c-methyltransferase | SB49_RS15230 | Not Available | Positive | 3447286 - 3448056 | 27429.3 |
| nad(p)/fad-dependent oxidoreductase | SB49_RS15235 | Not Available | Positive | 3448053 - 3449117 | 38624.6 |
| homocysteine s-methyltransferase family protein | SB49_RS15240 | Not Available | Positive | 3449585 - 3450589 | 36494.5 |
| methionine synthase | SB49_RS15245 | Not Available | Positive | 3450605 - 3453328 | 102077.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
