Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic diphosphatase | SB49_RS15150 | Not Available | Positive | 3426801 - 3427328 | 20049.2 |
| sodium-translocating pyrophosphatase | SB49_RS15155 | Not Available | Positive | 3427444 - 3429825 | 83489.6 |
| deoxynucleoside kinase | SB49_RS15160 | Not Available | Negative | 3429902 - 3430516 | 23878.5 |
| response regulator transcription factor | SB49_RS15165 | Not Available | Negative | 3430718 - 3431404 | 26412.2 |
| sensor histidine kinase kdpd | SB49_RS15170 | Not Available | Negative | 3431409 - 3432857 | 55348.4 |
| hypothetical protein | SB49_RS15175 | Not Available | Positive | 3432982 - 3433347 | 13929.0 |
| methionine adenosyltransferase | SB49_RS15180 | Not Available | Positive | 3433662 - 3434918 | 46213.8 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | SB49_RS15185 | Not Available | Positive | 3435232 - 3436527 | 45794.3 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | SB49_RS15190 | Not Available | Positive | 3436580 - 3439966 | 125289.0 |
| plp-dependent aspartate aminotransferase family protein | SB49_RS15195 | Not Available | Positive | 3439969 - 3441135 | 43097.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
