Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf427 domain-containing protein | SB49_RS15100 | Not Available | Negative | 3415441 - 3415722 | 10667.5 |
| l-histidine n(alpha)-methyltransferase | SB49_RS15105 | Not Available | Negative | 3415726 - 3416697 | 37138.4 |
| ergothioneine biosynthesis protein egtb | SB49_RS15110 | Not Available | Negative | 3416714 - 3417874 | 45559.4 |
| thymidylate synthase | SB49_RS15115 | Not Available | Negative | 3417950 - 3418774 | 31275.2 |
| nupc/nupg family nucleoside cnt transporter | SB49_RS15120 | Not Available | Negative | 3418918 - 3420300 | 48626.7 |
| bifunctional nuclease family protein | SB49_RS15125 | Not Available | Negative | 3420399 - 3421031 | 23738.4 |
| electron transfer flavoprotein subunit alpha/fixb family protein | SB49_RS15130 | Not Available | Negative | 3421119 - 3422087 | 33889.1 |
| electron transfer flavoprotein subunit beta/fixa family protein | SB49_RS15135 | Not Available | Negative | 3422156 - 3422902 | 26816.3 |
| pyruvate dehydrogenase complex e1 component subunit beta | SB49_RS15140 | Not Available | Positive | 3423088 - 3424065 | 35887.0 |
| duf5686 family protein | SB49_RS15145 | Not Available | Positive | 3424227 - 3426719 | 95193.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
