Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6089 family protein | SB49_RS15050 | Not Available | Positive | 3406462 - 3407154 | 25956.7 |
| isoprenyl transferase | SB49_RS15055 | Not Available | Positive | 3407164 - 3407904 | 28433.3 |
| outer membrane protein assembly factor | SB49_RS15060 | Not Available | Positive | 3407909 - 3410485 | 97074.8 |
| omph family outer membrane protein | SB49_RS15065 | Not Available | Positive | 3410591 - 3411421 | 32439.7 |
| omph family outer membrane protein | SB49_RS15070 | Not Available | Positive | 3411483 - 3411992 | 18747.7 |
| glutamate racemase | SB49_RS15075 | Not Available | Positive | 3412149 - 3412937 | 28739.8 |
| dihydrofolate reductase | SB49_RS15080 | Not Available | Negative | 3412934 - 3413434 | 18989.7 |
| 2tm domain-containing protein | SB49_RS15085 | Not Available | Negative | 3413416 - 3413820 | 16287.0 |
| aminotransferase class v-fold plp-dependent enzyme | SB49_RS15090 | Not Available | Positive | 3413880 - 3414965 | 40222.6 |
| isoamylase early set domain-containing protein | SB49_RS15095 | Not Available | Positive | 3415115 - 3415411 | 10953.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
