Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gh3 auxin-responsive promoter family protein | SB49_RS15000 | Not Available | Positive | 3397053 - 3398567 | 58480.8 |
| alpha/beta hydrolase | SB49_RS15005 | Not Available | Positive | 3398641 - 3399186 | 20465.7 |
| atp-dependent clp protease atp-binding subunit clpx | SB49_RS15010 | Not Available | Negative | 3399183 - 3400418 | 45842.5 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | SB49_RS15015 | Not Available | Negative | 3400515 - 3401195 | 25148.4 |
| trigger factor | SB49_RS15020 | Not Available | Negative | 3401285 - 3402607 | 50699.4 |
| phage holin family protein | SB49_RS15025 | Not Available | Negative | 3402714 - 3403055 | 12369.2 |
| alpha/beta fold hydrolase | SB49_RS15030 | Not Available | Negative | 3403215 - 3403985 | 29157.9 |
| pyridoxine 5'-phosphate synthase | SB49_RS15035 | Not Available | Negative | 3403985 - 3404710 | 26749.2 |
| cbs domain-containing protein | SB49_RS15040 | Not Available | Positive | 3404800 - 3405456 | 25171.1 |
| nad kinase | SB49_RS15045 | Not Available | Positive | 3405462 - 3406343 | 32790.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
