Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS14950 | Not Available | Negative | 3384572 - 3385024 | 16165.3 |
| Trna-leu | Not Available | Not Available | Positive | 3385575 - 3385661 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3385804 - 3385879 | Not Available |
| dna mismatch repair protein muts | SB49_RS14965 | Not Available | Negative | 3386080 - 3388656 | 97301.3 |
| rna methyltransferase | SB49_RS14970 | Not Available | Positive | 3388857 - 3389408 | 20322.4 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | SB49_RS14975 | Not Available | Negative | 3389531 - 3390673 | 44306.8 |
| signal peptide peptidase sppa | SB49_RS14980 | Not Available | Positive | 3390850 - 3392610 | 63944.5 |
| queuosine precursor transporter | SB49_RS14985 | Not Available | Positive | 3392613 - 3393326 | 27094.4 |
| asma-like c-terminal region-containing protein | SB49_RS14990 | Not Available | Positive | 3393423 - 3396152 | 99254.5 |
| duf2797 domain-containing protein | SB49_RS14995 | Not Available | Negative | 3396145 - 3396939 | 30949.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
