Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nramp family divalent metal transporter | SB49_RS14900 | Not Available | Negative | 3361368 - 3362615 | 45760.5 |
| vancomycin high temperature exclusion protein | SB49_RS14905 | Not Available | Negative | 3362694 - 3363329 | 24084.7 |
| hypothetical protein | SB49_RS14910 | Not Available | Negative | 3363511 - 3363960 | 16149.2 |
| hypothetical protein | SB49_RS14915 | Not Available | Positive | 3364315 - 3366726 | 91276.7 |
| fibronectin type iii domain-containing protein | SB49_RS14920 | Not Available | Positive | 3366730 - 3369975 | 121746.0 |
| hypothetical protein | SB49_RS14925 | Not Available | Positive | 3369978 - 3370469 | 19307.4 |
| hypothetical protein | SB49_RS14930 | Not Available | Positive | 3370459 - 3371664 | 46938.0 |
| hypothetical protein | SB49_RS14935 | Not Available | Positive | 3371789 - 3376744 | 183281.0 |
| fibronectin type iii domain-containing protein | SB49_RS14940 | Not Available | Positive | 3376782 - 3378842 | 77521.1 |
| t9ss type a sorting domain-containing protein | SB49_RS14945 | Not Available | Positive | 3378945 - 3384497 | 197437.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
