Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlpa disulfide reductase family protein | SB49_RS01430 | Not Available | Positive | 314681 - 315247 | 21388.2 |
| hypothetical protein | SB49_RS01435 | Not Available | Positive | 315252 - 315962 | 27461.0 |
| carotenoid biosynthesis protein | SB49_RS01440 | Not Available | Negative | 315948 - 316592 | 24036.8 |
| 1-hydroxycarotenoid 3,4-desaturase crtd | SB49_RS01445 | Not Available | Negative | 316596 - 318062 | 54802.5 |
| sterol desaturase family protein | SB49_RS01450 | Not Available | Negative | 318065 - 318514 | 17924.1 |
| phytoene/squalene synthase family protein | SB49_RS01455 | Not Available | Negative | 318514 - 319353 | 32327.8 |
| nad(p)/fad-dependent oxidoreductase | SB49_RS01460 | Not Available | Negative | 319364 - 320821 | 55405.4 |
| merr family transcriptional regulator | SB49_RS01465 | Not Available | Negative | 320850 - 321749 | 35099.5 |
| gfo/idh/moca family protein | SB49_RS01470 | Not Available | Positive | 321927 - 323279 | 50546.7 |
| duf1080 domain-containing protein | SB49_RS01475 | Not Available | Positive | 323351 - 324004 | 24894.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
