Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | SB49_RS14855 | Not Available | Negative | 3343061 - 3344239 | 44129.2 |
| histidine kinase | SB49_RS14860 | Not Available | Positive | 3344456 - 3346660 | 84093.6 |
| lyttr family dna-binding domain-containing protein | SB49_RS14865 | Not Available | Positive | 3346660 - 3347391 | 27611.2 |
| gamma carbonic anhydrase family protein | SB49_RS14870 | Not Available | Positive | 3347427 - 3347942 | 18085.9 |
| acp s-malonyltransferase | SB49_RS14875 | Not Available | Positive | 3348268 - 3349152 | 31564.3 |
| gliding motility-associated c-terminal domain-containing protein | SB49_RS14880 | Not Available | Positive | 3349274 - 3351778 | 88647.5 |
| fibronectin type iii domain-containing protein | SB49_RS14885 | Not Available | Positive | 3351960 - 3358136 | 210307.0 |
| type ix secretion system membrane protein porp/sprf | SB49_RS14890 | Not Available | Positive | 3358166 - 3359131 | 35348.5 |
| ompa family protein | SB49_RS14895 | Not Available | Positive | 3359144 - 3361066 | 72642.0 |
| hypothetical protein | SB49_RS15920 | Not Available | Negative | 3361073 - 3361264 | 7573.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
