Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | SB49_RS14805 | Not Available | Positive | 3331938 - 3333167 | 45742.6 |
| abc transporter permease | SB49_RS14810 | Not Available | Positive | 3333169 - 3334431 | 46107.3 |
| efflux rnd transporter periplasmic adaptor subunit | SB49_RS14815 | Not Available | Positive | 3334465 - 3335595 | 41230.4 |
| tolc family protein | SB49_RS14820 | Not Available | Positive | 3335625 - 3336974 | 50408.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | SB49_RS14825 | Not Available | Positive | 3336993 - 3337667 | 24741.8 |
| mechanosensitive ion channel family protein | SB49_RS14830 | Not Available | Negative | 3337664 - 3338482 | 30208.9 |
| thioredoxin domain-containing protein | SB49_RS14835 | Not Available | Negative | 3338556 - 3340607 | 78322.2 |
| dodecin family protein | SB49_RS14840 | Not Available | Negative | 3340731 - 3340931 | 7320.69 |
| nifu family protein | SB49_RS14845 | Not Available | Negative | 3341001 - 3341903 | 33937.0 |
| type ix secretion system membrane protein porp/sprf | SB49_RS14850 | Not Available | Positive | 3342028 - 3343017 | 36658.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
