Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | SB49_RS14755 | Not Available | Negative | 3324610 - 3325485 | 32709.2 |
| heme o synthase | SB49_RS14760 | Not Available | Positive | 3325603 - 3326502 | 33243.9 |
| heme-copper oxidase subunit iii | SB49_RS14765 | Not Available | Positive | 3326509 - 3327087 | 21923.3 |
| cytochrome c oxidase subunit 3 | SB49_RS14770 | Not Available | Positive | 3327242 - 3328216 | 36829.3 |
| cytochrome c oxidase subunit iv family protein | SB49_RS14775 | Not Available | Positive | 3328282 - 3328665 | 14952.8 |
| hypothetical protein | SB49_RS14780 | Not Available | Positive | 3328735 - 3329367 | 23876.9 |
| sco family protein | SB49_RS14785 | Not Available | Positive | 3329367 - 3330092 | 27514.7 |
| duf420 domain-containing protein | SB49_RS14790 | Not Available | Positive | 3330094 - 3330627 | 19937.3 |
| hypothetical protein | SB49_RS14795 | Not Available | Positive | 3330643 - 3330861 | 8053.17 |
| abc transporter atp-binding protein | SB49_RS14800 | Not Available | Positive | 3331244 - 3331945 | 25966.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
