Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome p450 | SB49_RS14705 | Not Available | Positive | 3307972 - 3309285 | 51018.1 |
| trna epoxyqueuosine(34) reductase queg | SB49_RS14710 | Not Available | Positive | 3309291 - 3310211 | 34988.8 |
| mfs transporter | SB49_RS14715 | Not Available | Positive | 3310420 - 3311754 | 49244.0 |
| nadp-dependent malic enzyme | SB49_RS14720 | Not Available | Positive | 3311878 - 3314175 | 84043.8 |
| holliday junction branch migration protein ruva | SB49_RS14725 | Not Available | Positive | 3314185 - 3314766 | 20990.5 |
| cell surface protein spra | SB49_RS14730 | Not Available | Positive | 3314772 - 3321935 | 267295.0 |
| glycine cleavage system protein gcvh | SB49_RS14735 | Not Available | Positive | 3322062 - 3322442 | 14020.4 |
| vanz family protein | SB49_RS14740 | Not Available | Positive | 3322435 - 3322836 | 15059.0 |
| energy transducer tonb | SB49_RS14745 | Not Available | Positive | 3322889 - 3323593 | 26696.1 |
| energy transducer tonb | SB49_RS14750 | Not Available | Positive | 3323726 - 3324529 | 30362.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
