Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper homeostasis protein cutc | SB49_RS14610 | Not Available | Positive | 3282065 - 3282787 | 26480.5 |
| metallophosphoesterase | SB49_RS14615 | Not Available | Positive | 3282844 - 3284073 | 47521.4 |
| co-chaperone ybbn | SB49_RS14620 | Not Available | Positive | 3284165 - 3284461 | 11049.5 |
| duf2723 domain-containing protein | SB49_RS14625 | Not Available | Negative | 3284503 - 3287838 | 128400.0 |
| Trna-gln | Not Available | Not Available | Positive | 3288005 - 3288076 | Not Available |
| hypothetical protein | SB49_RS16055 | Not Available | Negative | 3288358 - 3288513 | 5828.47 |
| ribosome assembly cofactor rimp | SB49_RS14635 | Not Available | Positive | 3288952 - 3289413 | 17219.7 |
| transcription termination factor nusa | SB49_RS14640 | Not Available | Positive | 3289427 - 3290659 | 46578.5 |
| translation initiation factor if-2 | SB49_RS14645 | Not Available | Positive | 3290703 - 3293504 | 102396.0 |
| spor domain-containing protein | SB49_RS14650 | Not Available | Negative | 3293580 - 3293951 | 14184.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
