Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | SB49_RS14560 | Not Available | Positive | 3268556 - 3268762 | 7772.39 |
| translation elongation factor ts | SB49_RS14565 | Not Available | Negative | 3268832 - 3269656 | 29392.1 |
| 30s ribosomal protein s2 | SB49_RS14570 | Not Available | Negative | 3269759 - 3270757 | 36845.6 |
| 30s ribosomal protein s9 | SB49_RS14575 | Not Available | Negative | 3271026 - 3271412 | 14583.9 |
| 50s ribosomal protein l13 | SB49_RS14580 | Not Available | Negative | 3271412 - 3271867 | 16805.3 |
| lipocalin family protein | SB49_RS14585 | Not Available | Positive | 3272181 - 3272663 | 17205.3 |
| ragb/susd family nutrient uptake outer membrane protein | SB49_RS14590 | Not Available | Negative | 3272806 - 3274455 | 60887.9 |
| tonb-dependent receptor | SB49_RS14595 | Not Available | Negative | 3274485 - 3277616 | 114291.0 |
| dna polymerase i | SB49_RS14600 | Not Available | Negative | 3278132 - 3280969 | 106833.0 |
| isoaspartyl peptidase/l-asparaginase family protein | SB49_RS14605 | Not Available | Negative | 3281027 - 3282022 | 35603.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
