Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin family protein | SB49_RS14510 | Not Available | Positive | 3255229 - 3255921 | 26295.6 |
| hypothetical protein | SB49_RS14515 | Not Available | Negative | 3255916 - 3256521 | 22974.4 |
| rna polymerase factor sigma-54 | SB49_RS14520 | Not Available | Negative | 3256521 - 3257978 | 55991.3 |
| asparagine--trna ligase | SB49_RS14525 | Not Available | Negative | 3258020 - 3259453 | 54519.1 |
| rnd family transporter | SB49_RS14530 | Not Available | Negative | 3259552 - 3261948 | 90801.3 |
| duf5686 family protein | SB49_RS14535 | Not Available | Negative | 3261996 - 3264506 | 96706.4 |
| ribosome recycling factor | SB49_RS14540 | Not Available | Negative | 3264588 - 3265142 | 20624.8 |
| ump kinase | SB49_RS14545 | Not Available | Negative | 3265187 - 3265894 | 25666.3 |
| peptidase m61 | SB49_RS14550 | Not Available | Positive | 3266078 - 3267940 | 69137.2 |
| hypothetical protein | SB49_RS14555 | Not Available | Positive | 3268090 - 3268566 | 18397.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
