Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate dehydrogenase e1 component | SB49_RS14460 | Not Available | Positive | 3246114 - 3248915 | 106420.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | SB49_RS14465 | Not Available | Positive | 3248943 - 3250172 | 44159.4 |
| tigr02281 family clan aa aspartic protease | SB49_RS14470 | Not Available | Negative | 3250205 - 3250657 | 16495.1 |
| tatd family hydrolase | SB49_RS14475 | Not Available | Positive | 3250694 - 3251461 | 29376.3 |
| asparaginase | SB49_RS14480 | Not Available | Positive | 3251476 - 3252504 | 38111.1 |
| Trna-ser | Not Available | Not Available | Positive | 3252571 - 3252658 | Not Available |
| mota/tolq/exbb proton channel family protein | SB49_RS14490 | Not Available | Positive | 3252738 - 3253526 | 27581.2 |
| hypothetical protein | SB49_RS14495 | Not Available | Positive | 3253553 - 3253996 | 15806.3 |
| biopolymer transporter exbd | SB49_RS14500 | Not Available | Positive | 3254009 - 3254635 | 23270.6 |
| biopolymer transporter exbd | SB49_RS14505 | Not Available | Positive | 3254657 - 3255139 | 18149.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
