Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad/nad(p)-binding oxidoreductase | SB49_RS14410 | Not Available | Positive | 3233984 - 3235288 | 48464.4 |
| pas domain-containing protein | SB49_RS14415 | Not Available | Positive | 3235739 - 3238039 | 88678.0 |
| response regulator | SB49_RS14420 | Not Available | Positive | 3238029 - 3238424 | 15011.2 |
| sugar porter family mfs transporter | SB49_RS14425 | Not Available | Negative | 3238832 - 3240184 | 49663.7 |
| 3-deoxy-d-manno-octulosonic acid transferase | SB49_RS14430 | Not Available | Negative | 3240303 - 3241538 | 46163.4 |
| degt/dnrj/eryc1/strs aminotransferase family protein | SB49_RS14435 | Not Available | Positive | 3241632 - 3242786 | 42382.0 |
| udp-glucose 4-epimerase gale | SB49_RS14440 | Not Available | Positive | 3242792 - 3243811 | 37267.6 |
| amidohydrolase family protein | SB49_RS14445 | Not Available | Positive | 3243821 - 3245098 | 45360.8 |
| hypothetical protein | SB49_RS14450 | Not Available | Positive | 3245130 - 3245483 | 13519.5 |
| hypothetical protein | SB49_RS14455 | Not Available | Negative | 3245480 - 3245971 | 18383.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
