Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | SB49_RS01380 | Not Available | Negative | 305275 - 305469 | 7088.28 |
| j domain-containing protein | SB49_RS01385 | Not Available | Negative | 305556 - 305996 | 17366.8 |
| srpbcc domain-containing protein | SB49_RS01390 | Not Available | Negative | 306199 - 306714 | 19727.4 |
| serine hydrolase | SB49_RS01395 | Not Available | Negative | 306695 - 307864 | 44933.5 |
| hypothetical protein | SB49_RS01400 | Not Available | Negative | 307907 - 308149 | 9287.13 |
| hypothetical protein | SB49_RS01405 | Not Available | Positive | 308287 - 309180 | 34995.5 |
| peptidylprolyl isomerase | SB49_RS01410 | Not Available | Positive | 309182 - 310615 | 54509.7 |
| moxr family atpase | SB49_RS01415 | Not Available | Positive | 310620 - 311573 | 35286.7 |
| aconitate hydratase | SB49_RS01420 | Not Available | Positive | 311772 - 314039 | 81969.2 |
| tlpa disulfide reductase family protein | SB49_RS01425 | Not Available | Positive | 314118 - 314678 | 21842.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
