Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | SB49_RS14355 | Not Available | Positive | 3221568 - 3222881 | 47380.6 |
| carbon-nitrogen hydrolase family protein | SB49_RS14360 | Not Available | Positive | 3222886 - 3223827 | 35044.7 |
| voc family protein | SB49_RS14365 | Not Available | Positive | 3223845 - 3224252 | 14381.3 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | SB49_RS14370 | Not Available | Positive | 3224256 - 3227003 | 105138.0 |
| biotin carboxylase | SB49_RS14375 | Not Available | Positive | 3227021 - 3228556 | 58365.9 |
| c45 family autoproteolytic acyltransferase/hydolase | SB49_RS14380 | Not Available | Positive | 3228674 - 3229762 | 40367.0 |
| nad-dependent succinate-semialdehyde dehydrogenase | SB49_RS14385 | Not Available | Positive | 3229829 - 3231187 | 49969.6 |
| hypothetical protein | SB49_RS14395 | Not Available | Positive | 3231586 - 3232164 | 22235.7 |
| hypothetical protein | SB49_RS14400 | Not Available | Negative | 3232356 - 3233117 | 28336.8 |
| duf2892 domain-containing protein | SB49_RS14405 | Not Available | Positive | 3233617 - 3233823 | 7560.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
