Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS14150 | Not Available | Positive | 3175098 - 3175433 | 12920.8 |
| type ii secretion system protein j | SB49_RS14155 | Not Available | Positive | 3175426 - 3175890 | 17863.8 |
| type ii secretion system f family protein | SB49_RS14160 | Not Available | Positive | 3175890 - 3177026 | 43370.6 |
| duf6876 family protein | SB49_RS14165 | Not Available | Positive | 3177710 - 3178063 | 13495.2 |
| bfma/btga family mobilization protein | SB49_RS16140 | Not Available | Positive | 3178567 - 3179112 | 20611.1 |
| mobb family relaxase | SB49_RS14175 | Not Available | Positive | 3179112 - 3180140 | 39451.0 |
| type iv secretory system conjugative dna transfer family protein | SB49_RS14180 | Not Available | Positive | 3180150 - 3181745 | 60034.1 |
| hypothetical protein | SB49_RS14185 | Not Available | Positive | 3182331 - 3182891 | 20899.1 |
| histidine kinase dimerization/phosphoacceptor domain -containing protein | SB49_RS14190 | Not Available | Positive | 3182896 - 3184713 | 68856.5 |
| lyttr family dna-binding domain-containing protein | SB49_RS14195 | Not Available | Positive | 3184734 - 3185504 | 29614.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
