Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS13995 | Not Available | Negative | 3132286 - 3133506 | 46293.8 |
| type ii secretion system protein gspd | SB49_RS14000 | Not Available | Negative | 3133506 - 3135728 | 82154.9 |
| gspe/pule family protein | SB49_RS14005 | Not Available | Negative | 3135732 - 3137153 | 53696.9 |
| general secretion pathway protein gspg | SB49_RS14015 | Not Available | Negative | 3137637 - 3138041 | 15083.3 |
| tail fiber protein | SB49_RS14020 | Not Available | Positive | 3138656 - 3139540 | 32666.8 |
| tail fiber protein | SB49_RS14025 | Not Available | Positive | 3139530 - 3140474 | 34792.8 |
| tail fiber protein | SB49_RS14030 | Not Available | Positive | 3140464 - 3141360 | 33596.1 |
| tail fiber protein | SB49_RS14035 | Not Available | Positive | 3141329 - 3142261 | 34970.7 |
| interleukin-like emt inducer domain-containing protein | SB49_RS14040 | Not Available | Positive | 3142262 - 3143242 | 35593.2 |
| rhs repeat domain-containing protein | SB49_RS14045 | Not Available | Positive | 3143232 - 3146471 | 121787.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
