Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| solute:sodium symporter family transporter | SB49_RS13950 | Not Available | Positive | 3122185 - 3123837 | 58773.1 |
| hypothetical protein | SB49_RS16050 | Not Available | Positive | 3124063 - 3124200 | 5186.51 |
| duf4407 domain-containing protein | SB49_RS13955 | Not Available | Negative | 3124250 - 3125350 | 41112.7 |
| m56 family metallopeptidase | SB49_RS13960 | Not Available | Negative | 3126360 - 3128156 | 67638.6 |
| blai/meci/copy family transcriptional regulator | SB49_RS13965 | Not Available | Negative | 3128159 - 3128524 | 14182.1 |
| dipeptidase | SB49_RS13970 | Not Available | Negative | 3128810 - 3130198 | 50824.4 |
| Trna-leu | Not Available | Not Available | Positive | 3130375 - 3130456 | Not Available |
| hypothetical protein | SB49_RS13980 | Not Available | Negative | 3130737 - 3131174 | 16562.1 |
| hypothetical protein | SB49_RS13985 | Not Available | Negative | 3131265 - 3131534 | 10191.0 |
| hypothetical protein | SB49_RS13990 | Not Available | Negative | 3131784 - 3132296 | 19802.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
