Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS13900 | Not Available | Negative | 3108232 - 3108876 | 23923.6 |
| slipin family protein | SB49_RS13905 | Not Available | Positive | 3109369 - 3110130 | 28978.9 |
| energy transducer tonb | SB49_RS13910 | Not Available | Positive | 3110310 - 3111041 | 27587.6 |
| hypothetical protein | SB49_RS13915 | Not Available | Positive | 3111157 - 3111567 | 15766.1 |
| cation diffusion facilitator family transporter | SB49_RS13920 | Not Available | Negative | 3111606 - 3112490 | 32447.6 |
| metallophosphoesterase family protein | SB49_RS13925 | Not Available | Negative | 3112578 - 3113483 | 35464.2 |
| gaf domain-containing protein | SB49_RS13930 | Not Available | Positive | 3113596 - 3115968 | 91646.7 |
| pycsar system effector family protein | SB49_RS13935 | Not Available | Negative | 3116065 - 3117267 | 46811.7 |
| metallophosphoesterase | SB49_RS13940 | Not Available | Positive | 3117323 - 3121030 | 139723.0 |
| hypothetical protein | SB49_RS13945 | Not Available | Negative | 3121071 - 3121931 | 32638.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
