Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(46)-n7)-methyltransferase trmb | SB49_RS13850 | Not Available | Positive | 3098510 - 3099181 | 25625.7 |
| lyse family transporter | SB49_RS13855 | Not Available | Positive | 3099185 - 3099814 | 23244.3 |
| mgmt family protein | SB49_RS13860 | Not Available | Positive | 3099816 - 3100163 | 13317.0 |
| mrp/nbp35 family atp-binding protein | SB49_RS13865 | Not Available | Positive | 3100322 - 3101461 | 40797.1 |
| nifu family protein | SB49_RS13870 | Not Available | Positive | 3101464 - 3101706 | 8742.57 |
| nad(p)/fad-dependent oxidoreductase | SB49_RS13875 | Not Available | Positive | 3101771 - 3102826 | 38261.3 |
| 2fe-2s iron-sulfur cluster-binding protein | SB49_RS13880 | Not Available | Positive | 3102931 - 3103260 | 12033.3 |
| abc transporter atp-binding protein | SB49_RS13885 | Not Available | Negative | 3103332 - 3105068 | 63268.5 |
| acylase | SB49_RS13890 | Not Available | Positive | 3105297 - 3107471 | 82642.2 |
| sgnh/gdsl hydrolase family protein | SB49_RS13895 | Not Available | Negative | 3107491 - 3108201 | 26298.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
