Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc ligand binding domain-containing protein | SB49_RS13750 | Not Available | Negative | 3077178 - 3077648 | 17712.9 |
| saccharopine dehydrogenase family protein | SB49_RS13755 | Not Available | Negative | 3077696 - 3079069 | 52213.0 |
| duf423 domain-containing protein | SB49_RS13760 | Not Available | Positive | 3079150 - 3079536 | 13899.6 |
| phosphoenolpyruvate carboxykinase (atp) | SB49_RS13765 | Not Available | Positive | 3079609 - 3081225 | 59834.9 |
| uroporphyrinogen-iii synthase | SB49_RS13770 | Not Available | Negative | 3081259 - 3082005 | 28816.1 |
| duf4271 domain-containing protein | SB49_RS13775 | Not Available | Negative | 3082011 - 3082667 | 25770.5 |
| glycosyltransferase family 39 protein | SB49_RS13780 | Not Available | Negative | 3082667 - 3084334 | 64960.7 |
| polyprenol monophosphomannose synthase | SB49_RS13785 | Not Available | Positive | 3084463 - 3085191 | 27998.2 |
| dihydroorotase | SB49_RS13790 | Not Available | Positive | 3085193 - 3086527 | 50001.5 |
| duf4296 domain-containing protein | SB49_RS13795 | Not Available | Positive | 3086527 - 3086967 | 16819.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
