Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium-dependent bicarbonate transport family permease | SB49_RS13650 | Not Available | Negative | 3056423 - 3057385 | 34735.5 |
| hypothetical protein | SB49_RS13655 | Not Available | Negative | 3057415 - 3057726 | 11674.0 |
| lysr family transcriptional regulator | SB49_RS13660 | Not Available | Positive | 3057844 - 3058767 | 34721.6 |
| hypothetical protein | SB49_RS13665 | Not Available | Negative | 3058786 - 3059142 | 13246.2 |
| tetr/acrr family transcriptional regulator | SB49_RS13670 | Not Available | Positive | 3059282 - 3059968 | 26882.3 |
| peptidase domain-containing abc transporter | SB49_RS13675 | Not Available | Positive | 3059961 - 3061628 | 62544.2 |
| hlyd family secretion protein | SB49_RS13680 | Not Available | Positive | 3061634 - 3062983 | 51252.2 |
| tolc family protein | SB49_RS13685 | Not Available | Positive | 3062983 - 3064386 | 53809.6 |
| yitt family protein | SB49_RS13690 | Not Available | Positive | 3064461 - 3065390 | 33848.4 |
| thioredoxin family protein | SB49_RS13695 | Not Available | Positive | 3065473 - 3066099 | 24047.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
