Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS13600 | Not Available | Negative | 3049941 - 3050378 | 16220.3 |
| transcription elongation factor grea | SB49_RS13605 | Not Available | Positive | 3050578 - 3051054 | 17152.7 |
| hit family protein | SB49_RS13610 | Not Available | Positive | 3051126 - 3051518 | 14414.7 |
| hypothetical protein | SB49_RS13615 | Not Available | Negative | 3051511 - 3051861 | 13741.8 |
| pas domain-containing sensor histidine kinase | SB49_RS13620 | Not Available | Negative | 3051863 - 3053008 | 43274.5 |
| flavin reductase family protein | SB49_RS13625 | Not Available | Positive | 3053128 - 3054003 | 32040.5 |
| duf3127 domain-containing protein | SB49_RS13630 | Not Available | Positive | 3054007 - 3054384 | 14335.9 |
| leucyl/phenylalanyl-trna--protein transferase | SB49_RS13635 | Not Available | Positive | 3054492 - 3055160 | 25501.8 |
| hypothetical protein | SB49_RS13640 | Not Available | Negative | 3055245 - 3055829 | 22928.1 |
| dna-3-methyladenine glycosylase i | SB49_RS13645 | Not Available | Negative | 3055819 - 3056382 | 21617.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
