Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine-binding protein | SB49_RS13550 | Not Available | Positive | 3038495 - 3038755 | 10043.1 |
| nicotinamide riboside transporter pnuc | SB49_RS13555 | Not Available | Positive | 3038739 - 3039377 | 24932.1 |
| aaa family atpase | SB49_RS13560 | Not Available | Positive | 3039332 - 3039895 | 22035.4 |
| duf4301 family protein | SB49_RS13565 | Not Available | Positive | 3039892 - 3041433 | 57814.3 |
| hypothetical protein | SB49_RS13570 | Not Available | Positive | 3041665 - 3041964 | 10768.8 |
| hypothetical protein | SB49_RS13575 | Not Available | Positive | 3042243 - 3042545 | 10734.5 |
| sigma-54 dependent transcriptional regulator | SB49_RS13580 | Not Available | Positive | 3042765 - 3044129 | 50760.8 |
| atp-binding protein | SB49_RS13585 | Not Available | Negative | 3044104 - 3046575 | 93136.2 |
| tonb-dependent receptor | SB49_RS13590 | Not Available | Positive | 3046897 - 3049068 | 81393.9 |
| tmem175 family protein | SB49_RS13595 | Not Available | Positive | 3049323 - 3049925 | 22849.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
