Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | SB49_RS13500 | Not Available | Positive | 3028401 - 3029291 | 32464.0 |
| pitrilysin family protein | SB49_RS13505 | Not Available | Negative | 3029329 - 3031398 | 76556.6 |
| pitrilysin family protein | SB49_RS13510 | Not Available | Negative | 3031406 - 3032728 | 49733.9 |
| hypothetical protein | SB49_RS13515 | Not Available | Positive | 3032908 - 3033348 | 16378.3 |
| 50s ribosomal protein l21 | SB49_RS13520 | Not Available | Positive | 3033463 - 3034005 | 19617.0 |
| 50s ribosomal protein l27 | SB49_RS13525 | Not Available | Positive | 3034028 - 3034288 | 9201.01 |
| duf3332 domain-containing protein | SB49_RS13530 | Not Available | Positive | 3034431 - 3035015 | 21807.3 |
| sdr family oxidoreductase | SB49_RS13535 | Not Available | Negative | 3035081 - 3036184 | 41816.1 |
| adenosylhomocysteinase | SB49_RS13540 | Not Available | Negative | 3036300 - 3037616 | 48532.3 |
| 4'-phosphopantetheinyl transferase superfamily protein | SB49_RS13545 | Not Available | Positive | 3037787 - 3038422 | 24402.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
