Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| simpl domain-containing protein | SB49_RS13450 | Not Available | Negative | 3018374 - 3019084 | 26848.0 |
| duf1697 domain-containing protein | SB49_RS13455 | Not Available | Negative | 3019278 - 3019832 | 21111.6 |
| rne/rng family ribonuclease | SB49_RS13460 | Not Available | Negative | 3020051 - 3021598 | 58644.1 |
| hu family dna-binding protein | SB49_RS13465 | Not Available | Negative | 3021868 - 3022158 | 10626.9 |
| a/g-specific adenine glycosylase | SB49_RS13470 | Not Available | Positive | 3022286 - 3023323 | 40206.4 |
| single-stranded dna-binding protein | SB49_RS13475 | Not Available | Positive | 3023348 - 3023818 | 17081.7 |
| gliding motility-associated protein glde | SB49_RS13480 | Not Available | Positive | 3023845 - 3025173 | 50417.7 |
| gliding motility lipoprotein gldd | SB49_RS13485 | Not Available | Positive | 3025163 - 3025720 | 21451.9 |
| pqq-binding-like beta-propeller repeat protein | SB49_RS13490 | Not Available | Negative | 3025772 - 3027658 | 71308.5 |
| hypothetical protein | SB49_RS13495 | Not Available | Negative | 3027777 - 3028229 | 17550.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
