Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 8-amino-7-oxononanoate synthase | SB49_RS13345 | Not Available | Positive | 3001510 - 3002649 | 41898.2 |
| duf2007 domain-containing protein | SB49_RS13350 | Not Available | Positive | 3002658 - 3003038 | 14665.6 |
| dethiobiotin synthase | SB49_RS13355 | Not Available | Positive | 3003054 - 3003671 | 22721.6 |
| glycosyltransferase family 39 protein | SB49_RS13360 | Not Available | Negative | 3003663 - 3005141 | 57029.1 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | SB49_RS13365 | Not Available | Positive | 3005220 - 3006488 | 47250.0 |
| beta-ketoacyl synthase n-terminal-like domain-containing protein | SB49_RS13370 | Not Available | Positive | 3006503 - 3007657 | 41825.7 |
| hypothetical protein | SB49_RS13375 | Not Available | Positive | 3007727 - 3008305 | 21197.2 |
| flotillin family protein | SB49_RS13380 | Not Available | Positive | 3008310 - 3009740 | 51863.2 |
| biotin synthase biob | SB49_RS13385 | Not Available | Positive | 3010058 - 3011152 | 40385.4 |
| cupin-like domain-containing protein | SB49_RS13390 | Not Available | Positive | 3011226 - 3012083 | 34018.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
