Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantoate--beta-alanine ligase | SB49_RS13295 | Not Available | Negative | 2986707 - 2987555 | 31928.6 |
| glycogen/starch synthase | SB49_RS13300 | Not Available | Positive | 2987658 - 2988467 | 31114.4 |
| duf4270 domain-containing protein | SB49_RS13305 | Not Available | Positive | 2988473 - 2990338 | 68453.1 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | SB49_RS13310 | Not Available | Positive | 2990443 - 2992290 | 67883.7 |
| tonb-dependent receptor domain-containing protein | SB49_RS13315 | Not Available | Positive | 2992507 - 2995305 | 102398.0 |
| hypothetical protein | SB49_RS13320 | Not Available | Positive | 2995324 - 2996985 | 57613.4 |
| f0f1 atp synthase subunit beta | SB49_RS13325 | Not Available | Positive | 2997173 - 2998681 | 54055.9 |
| f0f1 atp synthase subunit epsilon | SB49_RS13330 | Not Available | Positive | 2998763 - 2999044 | 9933.91 |
| gnat family n-acetyltransferase | SB49_RS13335 | Not Available | Negative | 2999104 - 2999637 | 20401.7 |
| m61 family metallopeptidase | SB49_RS13340 | Not Available | Negative | 2999640 - 3001448 | 67974.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
