Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS13245 | Not Available | Positive | 2975346 - 2976245 | 34269.4 |
| glycine--trna ligase | SB49_RS13250 | Not Available | Positive | 2976283 - 2977824 | 59286.5 |
| tonb-dependent receptor domain-containing protein | SB49_RS13255 | Not Available | Negative | 2977831 - 2979906 | 77110.7 |
| duf3575 domain-containing protein | SB49_RS13260 | Not Available | Negative | 2979907 - 2980452 | 20512.1 |
| exodeoxyribonuclease iii | SB49_RS13265 | Not Available | Positive | 2980741 - 2981511 | 29470.0 |
| aldo/keto reductase | SB49_RS13270 | Not Available | Positive | 2981554 - 2982594 | 39513.1 |
| dna repair protein rada | SB49_RS13275 | Not Available | Negative | 2982708 - 2984069 | 49737.1 |
| alpha/beta hydrolase | SB49_RS13280 | Not Available | Negative | 2984190 - 2985332 | 43625.3 |
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | SB49_RS13285 | Not Available | Negative | 2985358 - 2986323 | 36217.5 |
| aspartate 1-decarboxylase | SB49_RS13290 | Not Available | Negative | 2986326 - 2986676 | 12604.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
