Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS13195 | Not Available | Positive | 2962571 - 2963008 | 16257.7 |
| endonuclease/exonuclease/phosphatase family protein | SB49_RS13200 | Not Available | Negative | 2963050 - 2964096 | 40007.1 |
| tonb-dependent receptor | SB49_RS13205 | Not Available | Positive | 2964207 - 2966942 | 103361.0 |
| duf5689 domain-containing protein | SB49_RS13210 | Not Available | Positive | 2966961 - 2968334 | 50074.9 |
| response regulator | SB49_RS13215 | Not Available | Negative | 2968705 - 2969106 | 15407.0 |
| pas domain-containing protein | SB49_RS13220 | Not Available | Negative | 2969111 - 2971333 | 83972.6 |
| ankyrin repeat domain-containing protein | SB49_RS13225 | Not Available | Positive | 2971615 - 2972097 | 17501.0 |
| nitrilase family protein | SB49_RS13230 | Not Available | Positive | 2972188 - 2972964 | 29903.6 |
| ig-like domain-containing protein | SB49_RS13235 | Not Available | Negative | 2972948 - 2974522 | 59246.5 |
| comf family protein | SB49_RS13240 | Not Available | Negative | 2974616 - 2975293 | 25887.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
