Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein signal peptidase | SB49_RS13145 | Not Available | Positive | 2946884 - 2947516 | 23503.8 |
| 5-formyltetrahydrofolate cyclo-ligase | SB49_RS13150 | Not Available | Negative | 2947504 - 2948064 | 21169.8 |
| excinuclease abc subunit uvrc | SB49_RS13155 | Not Available | Positive | 2948704 - 2950491 | 68810.1 |
| patatin-like phospholipase family protein | SB49_RS13160 | Not Available | Positive | 2950509 - 2952746 | 83950.8 |
| 4-hydroxyphenylpyruvate dioxygenase | SB49_RS13165 | Not Available | Positive | 2952928 - 2954070 | 42929.1 |
| duf3108 domain-containing protein | SB49_RS13170 | Not Available | Positive | 2954391 - 2955170 | 29778.6 |
| tryptophan 2,3-dioxygenase family protein | SB49_RS13175 | Not Available | Positive | 2955177 - 2956139 | 38072.3 |
| peptidoglycan dd-metalloendopeptidase family protein | SB49_RS13180 | Not Available | Positive | 2956152 - 2957420 | 48507.8 |
| glucose-6-phosphate isomerase | SB49_RS13185 | Not Available | Positive | 2957423 - 2959060 | 60750.2 |
| tonb-dependent receptor | SB49_RS13190 | Not Available | Positive | 2959235 - 2962480 | 117735.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
