Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | SB49_RS13095 | Not Available | Positive | 2933694 - 2934155 | 17849.6 |
| duf3298 and duf4163 domain-containing protein | SB49_RS13100 | Not Available | Negative | 2934152 - 2934907 | 28751.1 |
| cystathionine gamma-synthase | SB49_RS13105 | Not Available | Positive | 2934994 - 2936148 | 41866.3 |
| nadp-specific glutamate dehydrogenase | SB49_RS13110 | Not Available | Positive | 2936252 - 2937595 | 48914.3 |
| dna repair protein reco | SB49_RS13115 | Not Available | Positive | 2937707 - 2938426 | 27780.7 |
| tonb-dependent siderophore receptor | SB49_RS13120 | Not Available | Positive | 2938410 - 2940842 | 91493.7 |
| duf4382 domain-containing protein | SB49_RS13125 | Not Available | Positive | 2941320 - 2942267 | 33648.0 |
| isoleucine--trna ligase | SB49_RS13130 | Not Available | Positive | 2942396 - 2945797 | 129386.0 |
| trar/dksa c4-type zinc finger protein | SB49_RS13135 | Not Available | Positive | 2945802 - 2946185 | 14600.5 |
| duf4097 family beta strand repeat-containing protein | SB49_RS13140 | Not Available | Positive | 2946291 - 2946848 | 20256.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
