Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase family protein | SB49_RS12995 | Not Available | Positive | 2915867 - 2916592 | 27863.8 |
| acyl-acp desaturase | SB49_RS13000 | Not Available | Positive | 2916654 - 2917649 | 38731.1 |
| hypothetical protein | SB49_RS13005 | Not Available | Negative | 2917686 - 2918243 | 20758.1 |
| aldehyde dehydrogenase family protein | SB49_RS13010 | Not Available | Negative | 2918716 - 2920269 | 55637.7 |
| chase domain-containing protein | SB49_RS13015 | Not Available | Negative | 2920362 - 2922011 | 62752.0 |
| 3-hydroxyanthranilate 3,4-dioxygenase | SB49_RS13020 | Not Available | Negative | 2922092 - 2922631 | 20874.9 |
| cap domain-containing protein | SB49_RS13025 | Not Available | Negative | 2922735 - 2923184 | 16594.3 |
| sos response-associated peptidase | SB49_RS13030 | Not Available | Positive | 2923537 - 2924301 | 29367.1 |
| cvpa family protein | SB49_RS13035 | Not Available | Negative | 2924344 - 2924865 | 19251.4 |
| hypothetical protein | SB49_RS13040 | Not Available | Positive | 2924927 - 2925283 | 13948.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
